Hi-C Illumina NovaSeq X Plus sequencing of Graptemys geographica: adu... - SRA

SRX24079004: Hi-C Illumina NovaSeq X Plus sequencing of Graptemys geographica: adult peripheral blood tissue (CBP00722/SJ_432)
1 ILLUMINA (Illumina NovaSeq X Plus) run: 159.7M spots, 47.9G bases, 12.3Gb downloads

Design: Hi-C Illumina sequencing of Arima HiC library of normal adult peripheral blood tissue (CBP00722/SJ_432) (library ID F137733), constructed from sample accession SAMN40462801 for study accession PRJNA1025286. Peripheral Blood tissue was crosslinked using the Arima High Coverage HiC Kit User Guide Nucleated Blood.Doc A160177 v01 kit at the Genome Sciences Centre (Vancouver, BC, Canada). The library was sequenced on an Illumina NovaSeq X Plus at the Genome Sciences Centre (Vancouver, BC, Canada).

Submitted by: Canada's national platform for genome sequencing and analysis (Canadian BioGenome)

Study: Graptemys geographica (northern map turtle) genomic and transcriptomic data

PRJNA1025286 • SRP467975 • All experiments • All runs

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This project collects the genomic and transcriptomic data generated for the northern map turtle (Graptemys geographica), to facilitate genome assembly and annotation as part of the Canadian BioGenome Project (https: //www.earthbiogenome.ca/) provided by CGEn - Canada's national platform for genome sequencing and analysis, and its partners. The data under this project are made available subject to the Canadian BioGenome Project Open Data Release Policy.

Sample: Blood from adult female Graptemys geographica (Northern Map Turtle), NorthernMapTurtle01-CBP00722/SJ_432: CBPint0051, rGraGeo1

SAMN40462801 • SRS20869040 • All experiments • All runs

Organism: Graptemys geographica

Library:

Name: F137733

Instrument: Illumina NovaSeq X Plus

Strategy: Hi-C

Source: GENOMIC

Selection: Restriction Digest

Layout: PAIRED

Runs: 1 run, 159.7M spots, 47.9G bases, 12.3Gb

Run	# of Spots	# of Bases	Size	Published
SRR28476183	159,716,870	47.9G	12.3Gb	2024-03-27

ID:: 32386466

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